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Posted: 26th April 2010 by admin in Articles

Now Jean-Paul Paluzzi, a PhD candidate in biology at the University of Toronto Mississauga, believes that manipulating physiology to prevent the insects from leaving their messy calling card represents the best hope for stopping the transmission of the illness, known as Chagas’ disease.

“This is a disease of the poor,” says Paluzzi, who has visited parts of the world affected by the illness. “The bugs are found in makeshift homes with mud walls and palm tree-like ceilings. Unfortunately, the people of Central and South America that this affects don’t have sufficient voice to get help. Given that there are roughly 15 to 19 million people that are infected-a substantial proportion of that area’s population-it’s a disease that’s been neglected.”

Chagas’ disease is one of the major health problems in South and Central America and is spread by reduvid bugs, also known as “kissing bugs” because of their fondness for lips. The disease they transmit is caused by Trypanosoma cruzi, a parasite that lives in their gut. In the initial acute stage, symptoms are relatively mild, but as the disease progresses over several years, serious chronic symptoms can appear, such as heart disease and malformation of the intestines. Without treatment, it can be fatal. Currently, insecticide sprays are used to control insect populations, and anti-parasitic drugs are somewhat successful at treating acute infections. Once the disease is chronic, it cannot be cured.

To make matters worse, kissing bugs are particularly “bloodthirsty”. In mosquitoes, which go through four distinct stages of development, only adult females feed on blood (and potentially transmit disease). This means that pest control methods need to target only one out of eight stages (when you include both sexes). But in kissing bugs, each sex feeds on blood through all fives stages of development. “So you have about a ten-fold greater chance of infection just because of the number of times that these insects have to feed,” says Paluzzi.

His research focuses on insect diuresis-more specifically, the genes and peptides that control how the kissing bug eliminates excess fluid in its gut after it gorges on blood. For the insect, the real prize in its meal is the red blood cells, while the water and salt is “excess baggage”. After they feed, the bugs are bloated and sluggish, and must jettison the waste so they can make their escape.

Here’s how it happens: when the kissing bug finds a snoozing victim and feeds, its levels of serotonin and diuretic hormones rise sharply, targeting the insect’s midgut and Malpighian tubules (the equivalent of kidneys), and triggering the release of waste. About four hours later, a peptide named CAP2b is released in the insect’s gut, abolishing the effect of the diuretic hormones.

Paluzzi has identified two genes (RhoprCAPA-alpha and RhoprCAPA-beta) that carry the chemical recipe for the peptides that stop diuresis. With that information, he hopes to create a peptide “agonist”-something that would enhance the activity of the CAP2B peptide and prevent the insect from leaving waste (and the parasite) on the wound. In theory, says Paluzzi, this might be an insecticide-like room spray or topical lotion that is biologically stable and has no effect on humans or other insects. Paluzzi is collaborating with a structural biochemist at the U.S. Food and Drug Administration in Texas, with the ultimate goal of creating a pest control solution, but he cautions that a market-ready product is many years away.

Research Ideas

Posted: 26th April 2010 by admin in Articles

The Molecular Mechanics of Hearing and Deafness (w/ Video)

April 26, 2010

(PhysOrg.com) — Our senses are essential for survival and for the exploration of natural environments, and much has been learned about the molecular basis of vision, olfaction, and taste. Yet only a few of the molecules mediating touch and sound perception have been discovered.

Now, with the help of x-ray light sources at two U.S. Department of Energy national laboratories, researchers from Harvard University and the Harvard Medical School have resolved the molecular structure of one key protein important for sound perception. They have used this structure, together with molecular dynamics simulations to understand the proteins mechanics and function in hearing and deafness.

Hair cells of the inner ear are exquisite mechanoreceptors: minute motion of their apical hair bundles by sound becomes an electrical signal that is then transmitted to the brain. At the core of this mechanotransduction process there is a fine filamenttermed the tip linkthat pulls open force-gated ion channels, thereby causing depolarization. This tip link filament is made of two atypical cadherins, cadherin-23 and protocadherin-15. Mutation of either causes hereditary deafness.

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Cadherin-23 stretching simulations. A close-up view of the linker region between cadherin-23 repeats 1 and 2 is shown during a molecular dynamics simulation in which the protein is stretched from both ends. The simulations mimic in vivo conditions in which tip-link cadherins are stretched during sound mechanotransduction at hair cells of the inner ear. Calcium ions (shown as green spheres) were found to be essential for the mechanical stability of the protein (shown in cartoon and sticks).

In the first step of elucidating the function of these proteins, the researchers, from the Gaudet lab at the Harvard University Department of Molecular and Cellular Biology, and the Corey lab at the Harvard Medical Schools Department of Neurobiology, determined the x-ray crystal structure of cadherin-23’s N-terminal end. To this end, the research team utilized the Northeastern Collaborative Access Team 24-ID-E x-ray beamline at the Advanced Photon Source (APS) at Argonne National Laboratory, and the X25H beamline at the National Synchrotron Light Source (NSLS) at Brookhaven National Laboratory.

The structure (presented in the April 15, 2010 issue of Neuron) revealed a novel calcium binding site that defines a subfamily of cadherin adhesion molecules. Classical cadherins, the calcium-dependent “glue” that keeps cells together in multicellular organisms, use a “strand-exchanged” mechanism to form adhesive bonds. However, the new structure suggests that cadherin-23 must use a different mechanism, perhaps through a calcium bridge, with calcium ions participating in the interface between cadherin-23 and protocadherin-15. Such a mechanism would readily explain why tip links and mechanosensitivity disappear in the absence of calcium.

With the cadherin-23 structure in hand, the team used molecular dynamics simulations to determine its elasticity. The tip link has been assumed to be a relatively elastic, spring-like molecule. However, an extensive set of atomistic simulations performed using parallel supercomputers with thousands of processors and the NAMD software developed at the University of Illinois at Urbana-Champaign, suggest otherwise. The simulations revealed a stiff cadherin-23 molecule, with tightly-bound calcium ions preventing mechanical unfolding. The tip link is, therefore, suggested to be a stiff cable conveying force to transduction channels, with some undetermined molecular component providing the necessary elasticity for the system.

Structural information on wild-type and mutant cadherin-23 proteins can help pinpoint the mechanisms by which mutations cause disease. The team used the determined a crystal structure of cadherin-23 carrying a mutation known to cause deafness in humans. Biochemical assays demonstrated that this mutation impairs calcium binding, and simulations showed that in the absence of bound calcium cadherin-23 becomes a mechanically weak protein. The mutation-induced weakening of cadherin-23 suggests that mutant tip links are more prone to mechanical failure, causing hearing loss.

These results open the door to understanding how cadherin-23 interacts with protocadherin-15 to create a complete tip link, how other cadherin molecules involved in sensory perception work, and how mutations in other cadherins might cause inherited diseases such as progressive myocardial dystrophy.

Research Ideas

Posted: 13th April 2010 by admin in Articles

The truffle, found mainly in France but also in Spain and Italy, is known by its Latin name of Tuber melanosporum.

But to truffle fanatics in the southwestern French region of Perigord, the warty, golfball-sized fungus is known as the “black diamond.”

It can reach 1,000 euros a kilo (605 dollars a pound) at local farmers’ markets, and several times more at shops in Paris.

A tri-nation group led by geneticists at France’s National Institute for Agricultural Research (INRA) says that the truffle has a DNA signature pointing to its geographical origins.

Its genome comprises 125 million base pairs — the “rungs” on the double-helix genetic ladder — which encompass 7,500 genes, of which 6,000 are shared by other fungi.

The remaining 1,500 genes play a key role in the truffle’s development and its symbiosis, or linked growth, with the roots of a host tree, predominantly the oak.

In addition, the genome is studded with DNA telltales crafted by the nature of the soil and other local factors.

Ten of these markers will go to a “truffle databank,” covering some 50 areas in France, Italy and Spain where T. melanosporum is found.

“This database of genetic fingerprints will help identify the regional origin of harvested truffles and set up the means to certify these products and detect any frauds,” INRA said.

Truffle hunters in France use trained pigs or dogs to sniff out the delicacy, which is found buried just under the soil surface.

They are incensed by the incursion into the market of cheap rivals, especially Chinese truffles that are often passed off as “black diamonds.”

One of these Chinese species is sometimes seeded with extracts from the real T. melanosporum to boost a lacklustre aroma. Another is rarer but is so similar to T. melanosporum that, until now, the only sure way to distinguish the two is analysis by an expert.

Truffle associations are calling for the European Union (EU) to create a special appellation or origin to protect their national treasure.

The genome, which took five years to compile, is reported online by the British journal Nature.

More related research content: http://www.inqua2007.net.au/

Research Ideas

Posted: 13th April 2010 by admin in Articles

A mission to clear dangerous debris from space (w/ Video)

March 28, 2010

CubeSail

(PhysOrg.com) — New UK technology is set to play a major part in clearing dangerous clouds of debris hurtling around the Earth’s lower orbit.

More than 5,500 tonnes of debris is believed to be cluttering space around the planet as a result of 50 years of abandoning spacecraft, leading to a threat of collision to any manned or unmanned spacecraft, the destruction of hugely expensive technology and the potential threat of large debris plummeting back to Earth.

The build-up of debris – expected to grow at a rate of 5% each year – is also believed to obstruct satellite television and other communications signals.

Scientists at the University of Surrey, working on the project funded by the European space company Astrium, have devised a 3 kg miniature satellite or “nanosatellite” fitted with a “solar sail”.

“CubeSail” is a device which can be fitted to satellites or launch vehicle upper stages that are sent into orbit and then can be deployed to successfully de-orbit equipment that has reached the end of its mission.

A 5 x 5 m, 3 kg, deployable sail is being developed to fit in a 10 x 10 x 30 cm nanosatellite and will be used in a demonstration mission to be launched in late 2011 demonstrating passive means of deorbiting for future satellites.

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Dr Vaios Lappas, lead researcher on the project and Senior Lecturer in Space Vehicle Control at the Surrey Space Centre, said: “Protecting our planet and environment is key for sustainable growth. CubeSail is a novel, low cost space mission which will demonstrate for the first time space debris/satellite deorbiting using an ultra light 5 x 5 sail stowed and supported on a 3 kg nanosatellite.

Successful deployment and testing of the sail can enable a low cost/mass solution to be used for future satellites and launch vehicle upper stages reducing dramatically the problem of space debris.

“Following successful in orbit demonstration, the proposed deorbit system will be offered as a standard deorbit system for Low Earth Orbit missions for satellites with a mass of less than 500 kg at a very low cost.” “

CubeSail is due to be ready for launch on new satellites next year, and is expected to be available for shifting existing debris from 2013.

Dr Craig Underwood, Deputy Director of the Surrey Space Centre, and Reader in Spacecraft Engineering at SSC, said: The launch of this innovative new technology is very timely. This week’s announcement of the creation of the UK’s space agency is evidence of the commitment to space initiatives and their huge potential for creating growth in the UK economy. At the same time, this exciting future is increasingly dependent on finding a sustainable approach to launching and disposing safely of spacecraft.

Provided by University of Surrey

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  • yeetoot – 7 hours ago
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    I nice lazer gun would be cool, Like the one you see on Star Trek? Major coolness

    Lou
    www.anon-web-surfing.it.tc

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  • Bob_B – 7 hours ago
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  • eachus – 3 hours ago
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    Toally misleading headline. The dangerous debris in low-earth orbit, are very small objects and pieces of old upper stages that exploded in orbit. (No it wasn’t intentional, and yes, once the problem was discovered the rockets were modified to prevent the problem.) Today it is ancient history–except that Cheyanne Mountain is still tracking tens of thousands of such objects.

    There are even smaller particles that can’t be easily tracked, and many too small to be tracked at all. But one microscopic paint fleck did take a divot of a space shuttle windshield.

    So the big pieces, the obsolete spacecraft still on orbit are not a big problem. It is getting the count of pieces orbited per spacecraft down to one.

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  • Sepp – 2 minutes ago
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    The launch of this innovative new technology is very timely. This week’s announcement of the creation of the UK’s space agency is evidence of the commitment to space initiatives and their huge potential for creating growth in the UK economy.”

    Sounds like hype to me. As eachus says, there are lots of small pieces up there and this sail (innovative technology?) does nothing to reduce their number.

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Research Ideas

Posted: 13th April 2010 by admin in Articles

Digital billboards change images every four to 10 seconds, flashing multiple messages from one or more advertisers on the same sign. Opponents such as John Regesnbogen of Scenic Missouri deride them as “television on a stick.”

Several communities have banned digital billboards outright, the most recent being Denver earlier this month. Other places have put a moratorium on them pending a federal study on whether they distract drivers. At least one other city and two states are studying moratoriums.

“The digital billboards are a distraction,” says Fred Wessels, an alderman in St. Louis, which just approved a one-year moratorium on such signs.

“If they weren’t distracting, they wouldn’t be doing their job,” says Max Ashburn, spokesman for Scenic America, a national nonprofit group that seeks to limit billboards.

Research on the issue is mixed. A Virginia Tech Transportation Institute study in 2007, financed by the billboard industry, found that they aren’t distracting. A review of studies completed last year for the American Association of State Highway and Transportation Officials, however, concluded that they “attract drivers’ eyes away from the road for extended, demonstrably unsafe periods of time.”

“There’s no doubt in my mind that they are not a driving distraction,” says Bryan Parker, an executive vice president for Clear Channel Outdoor, which owns about 400 digital billboards. He cites industry-sponsored studies of collisions before and after digital billboards were installed in Albuquerque, N.M.; Cleveland; and Rochester, Minn., that found no correlation.

“We’ve looked at that very carefully,” says Bill Ripp, vice president of Lamar Advertising, which owns 159,000 billboards, 1,150 of them digital. “We don’t want to cause any unsafe conditions for drivers.”

Digital billboards are a fast-growing segment of the outdoor advertising market. Since a federal rule against them was eased in 2007, the number of digital billboards has more than doubled to about 1,800 of 450,000 total billboards. At least 39 states allow them. They cost an average $200,000 to $300,000 apiece, according to the industry group Outdoor Advertising Association of America.

In 2007, the Federal Highway Administration relaxed a rule against digital billboards, saying they don’t violate the 1965 Highway Beautification Act’s ban on “intermittent,” “flashing” or “moving” lights. FHWA is researching the signs, using eye-trackers inside volunteers’ vehicles to determine whether drivers look at the billboards and for how long. The study is to be completed this summer.

There is little current data on whether greater distractions for drivers come from in-vehicle or external factors.

The Department of Transportation, which is leading a national push against texting while driving, says that 5,870 people were killed in distracted-driving crashes in 2008. The department has not determined how many of those deaths involved an electronic device, another distraction such as eating or tuning the radio, or something outside the vehicle such as a digital billboard.

Research Ideas

Posted: 13th April 2010 by admin in Articles

Nanoparticles Unlock Tumor Identity

March 28, 2010

(PhysOrg.com) — Using nanoparticles designed to recognize specific sugar-binding molecules on the surfaces of cells, a team of investigators at Michigan State University has developed a process that uses magnetic resonance imaging (MRI) to unlock the sugar-based code that identifies different types of cancer and normal cells. This work, led by Xuefei Huang, Ph.D., was published in the Journal of the American Chemical Society.

The investigators began their study by synthesizing a collection of magnetic nanoparticles, each coated with a different type of sugar. All mammalian cells contain a collection of sugar-binding receptors, known as lectins, on their surfaces, and each lectin has a characteristic affinity for one or more sugars.

By using multiple nanoparticles, each coated with a different sugar, Dr. Huangs team was able to identify a sugar-binding signature that was characteristic of specific types of cells. Because the nanoparticles are strongly magnetic, they are readily imaged using magnetic resonance imaging (MRI), with each nanoparticle generating a well-differentiated MRI signal.

With five different sugar-coated magnetic nanoparticles in hand, the researchers tested their ability to discriminate among 10 different types of cells. Using a mathematical method known as linear discriminant analysis, the investigators showed that they could readily identify all 10 cell types through an analysis of the combined MRI signals produced by each nanoparticle. Not only was this method able to distinguish between malignant and normal cells, but between closely related cancer cells that are indistinguishable based on a qualitative analysis of their sugar or protein composition.

This work is detailed in a paper titled, “Magnetic Glyco-Nanoparticles: A Tool to Detect, Differentiate, and Unlock the Glyco-Codes of Cancer via Magnetic Resonance Imaging.” An abstract of this paper is available at the journals Web site.

Provided by National Cancer Institute (news : web)

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    Posted: 13th April 2010 by admin in Articles

    The myth may come closer to reality this summer than at any time in decades in several states in the West and the Plains.

    A federal survey of adult grasshoppers last fall indicated that parts of Wyoming, Montana, South Dakota, North Dakota, Nebraska and Idaho could face costly grasshopper infestations this summer.

    Ranchers and farmers as well as federal and municipal pest control agencies are praying for well-timed cool and wet weather to stifle the young grasshoppers when they hatch around May and June.

    In the meantime, they’re scrambling to line up the millions of dollars it will cost to battle an outbreak with aerial insecticide.

    “They’re grass eaters,” said Tom Wright, a rancher near Newcastle in northeast Wyoming about 20 miles from the South Dakota border. “They’ll eat the leaves and leave the stem. And they will eat the stems finally.

    “When they’re really thick, people say they’ll eat T-shirts on a line,” he said as he recalled a time in the mid-1980s when the grasshoppers were so thick that you couldn’t put your hand on the shady side of a fence post without squashing one.

    Grasshoppers are found across the United States, but outbreaks of pest species are most common in the Plains and Western states. Different species range from a length of under an inch to more than 3 inches.

    They provide some ecological benefits, serving as a food source for other animals. However, some pest species are capable of eating their body weight daily in vegetation and can waste up to six times more by dropping forage to the ground.

    Making matters worse is the prevalence of migratory species in the latest surveys – insects that can fly 60 miles in a day.

    The Wyoming acreage infested with 15 or more grasshoppers per square yard increased more than 10-fold from 2008 to 2.9 million acres last summer, according to federal surveys.

    Regionwide, surveys predict at least 48 million acres of outbreak-level infestation this summer.

    “In some states, we may see some of the most severe grasshopper outbreaks that we’ve seen in nearly 30 years,” said Charles Brown, the national grasshopper suppression program manager at the U.S. Department of Agriculture’s Animal and Plant Health Inspection Service.

    No government agency keeps a comprehensive tally of the economic damage from grasshoppers, but the cost of spray programs can exceed a million dollars for a single county.

    Last summer, when an outbreak first surfaced in Wyoming, the voracious insects hurt hay production and prompted some ranchers to downsize their herds.

    Wright didn’t sell any cattle because of grasshoppers, but his calves weighed 30 pounds lighter than normal last fall as a result of the insects eating up forage. The grass damage also forced the ranch to buy extra feed to help its cows through the winter, costing about $10,000, he said.

    Paying to participate in a spray program could make sense if it was cheaper than the alternatives, he said.

    “At the point that (grasshoppers) eat all the grass, you have to either sell all your cows, lease grass somewhere else or buy hay,” he said.

    Grasshopper eggs tend to survive better in untilled soil, but that doesn’t stop the grown insects from hopping to cropland and eating crops such as corn, alfalfa, sunflowers, soybeans and sugar beets.

    “In the past couple of years, we’ve had some crop damage by grasshoppers, especially alfalfa and soy beans,” said Dave Boxler, a research technologist in entomology for the University of Nebraska based in North Platte.

    In Wyoming, Gov. Dave Freudenthal announced this month a $2.7 million plan to help local pest districts and to pay for spraying on state lands this summer. Freudenthal and the state’s congressional delegation have also urged the federal government to make more money available for treating federal rangeland.

    Pest managers combat rangeland grasshoppers by using planes to spray alternating strips of land with an insecticide that kills the bugs in the nymphal stage, meaning it must be applied within a few weeks after eggs hatch.

    Entomologist Scott Schell of the University of Wyoming said the insecticide, Dimilin 2L, has a very low toxicity level for mammals, reptiles and birds. It also has little effect on bees, he said.

    Gail Mahnke, supervisor of the Niobrara County Weed and Pest Control District, said she expects grasshopper treatment in the eastern Wyoming county to run about $1.2 million this summer. That works out to a cost to landowners of about $1.65 a protected acre. The district plans to spend its $60,000 in emergency reserves on the project, she said.

    Mahnke said she’s not sure what will happen if weather conditions unexpectedly kill off the grasshoppers.

    “When you’re talking a $1.2 million deal just in this county, and getting it all set up and having all that money sitting here, and then those conditions just happen to hit perfect, what do you do?” she said.

    Research Ideas

    Posted: 13th April 2010 by admin in Articles

    The study — an observational analysis of the DART trial published by The Lancet in 2009 — was written by Dr A Sarah Walker, MRC Clinical Trials Unit, London, UK, and colleagues in Uganda, Zimbabwe and the UK.

    Co-trimoxazole (trimethoprim-sulfamethoxazole) is a widely available, off-patent, low-cost antibiotic that is used in resource-limited settings to treat and prevent community-acquired infections. In HIV infection, it is highly effective for treatment of and prophylaxis against Pneumocystis jirovecii pneumonia, Toxoplasma gondii, Isospora belli, and bacterial infections; it also has antimalarial properties.

    Results of clinical trials and observational studies in HIV-infected adults and children across Africa who are not taking anti-HIV treatment have shown that co-trimoxazole prophylaxis reduces mortality, morbidity, and hospital admissions, even in areas of high background bacterial resistance. WHO guidelines recommend that co-trimoxazole prophylaxis is given to all symptomatic adults with CD4 counts lower than 350 cells per ?L in resource-limited settings, and is continued when people start HIV treatment. However, these recommendations for continuing co-trimoxazole with anti-HIV treatment were based on extrapolation from US studies. There were no African data and concerns about limited benefit and the potential to compromise adherence led to variable use in low-income settings.

    Participants in this new analysis were from the DART randomised trial of management strategies in HIV-infected, symptomatic, previously untreated Ugandan and Zimbabwean adults starting triple-drug ART with CD4 counts lower than 200 cells per ?L. Co-trimoxazole prophylaxis was not routinely used or randomly allocated, but was variably prescribed by clinicians. The authors estimated the effects of prophylaxis on clinical outcomes, CD4 cell count, and body-mass index (BMI).

    The results covered 3179 participants who contributed 14 214 years of follow-up (8128 [57%] person-years on co-trimoxazole). Predictors of co-trimoxazole use were the most recent CD4 cell count, haemoglobin concentration, and BMI; and previous WHO stage 3 or 4 events on ART. Current prophylaxis reduced risk of death by 35% overall. Mortality risk reduction on ART was substantial to 12 weeks (59%), sustained from 12? weeks (44%), but not evident after 72 weeks. Variation in mortality reduction was not accounted for by time on co-trimoxazole, nor surprisingly by current CD4 cell count. Prophylaxis also reduced frequency of malaria by 26%, an effect that was maintained with time. Of note, no statistically significant effect of prophylaxis was observed on new WHO stage 4 events (eg opportunistic infections such as oesphageal candidiasis, cryptococcal disease, or extra-pulmonary tuberculosis), CD4 cell count, or BMI.

    The authors say: “Since DART participants, who had advanced immunodeficiency and symptomatic disease, had similar characteristics to those of most patients starting ART in rollout programmes in Africa, our findings should be generalisable.”

    Furthermore, the authors point out that mortality in patients accessing ART programmes in sub-Saharan Africa is very high in the first year on treatment, with 8% of patients dying, most in the first 3-4 months. Even when baseline immunodeficiency is allowed for, early mortality is several times higher in resource-limited settings than it is in high-income settings.

    They conclude: “In DART, adherence was high, and concerns that initiation of both co-trimoxazole and ART together might lead to unacceptably high rates of toxic effects are not substantiated by our data. The mortality benefits, safety, and tolerability, together with the low cost and simplicity of implementation, suggest that co-trimoxazole prophylaxis [combined with anti-HIV treatment] is cost effective and has a substantial public health effect. Our results reinforce WHO guidelines and provide strong motivation for provision of co-trimoxazole prophylaxis for at least 72 weeks to all adults starting combination ART in Africa.”

    They add: “Whether co-trimoxazole can be stopped after this 72 week period needs further investigation.”

    In an accompanying Comment, Dr Xavier Anglaret, INSERM, U897, Universit? Victor Segalen Bordeaux, France, and Dr Serge Eholie, Service des Maladies Infectieuses et Tropicales, CHU de Treichville, Abidjan, Ivory Coast, say: “Why duration of combination ART (cART) is the key determinant of co-trimoxazole efficacy, independent of current CD4 cell count, is uncertain. However, the results of today’s study clearly suggest that in sub-Saharan Africa, starting on cART should not be a reason for not starting or for stopping co-trimoxazole, and that prophylaxis should be maintained for more than 1 year after starting cART. Furthermore, the findings of this study show that important practical questions about HIV management can be answered with cohort data, as long as the study meets standard research criteria. For countries with restricted resources to address such questions, large cohort studies, such as DART, need to be done.”

    Research Ideas

    Posted: 13th April 2010 by admin in Articles

    Microbial answer to plastic pollution?

    March 28, 2010

    These are microbes from the coastal seabed attached to plastic, as seen through a microscope. Credit: Jesse Harrison

    Fragments of plastic in the ocean are not just unsightly but potentially lethal to marine life. Coastal microbes may offer a smart solution to clean up plastic contamination, according to Jesse Harrison presenting his research at the Society for General Microbiology’s spring meeting in Edinburgh today.

    The researchers from the University of Sheffield and the Centre for Environment, Fisheries and Aquaculture Science have shown that the combination of marine microbes that can grow on plastic waste varies significantly from microbial groups that colonise surfaces in the wider environment. This raises the possibility that the plastic-associated marine microbes have different activities that could contribute to the breakdown of these plastics or the toxic chemicals associated with them.

    Plastic waste is a long-term problem as its breakdown in the environment may require thousands of years. “Plastics form a daily part of our lives and are treated as disposable by consumers. As such plastics comprise the most abundant and rapidly growing component of man-made litter entering the oceans,” explained Jesse Harrison.

    Over time the size of plastic fragments in the oceans decreases as a result of exposure to natural forces. Tiny fragments of 5 mm or less are called “microplastics” and are particularly dangerous as they can absorb toxic chemicals which are transported to marine animals when ingested.

    While microbes are the most numerous organisms in the marine environment, this is the first DNA-based study to investigate how they interact with plastic fragments. The new study investigated the attachment of microbes to fragments of polyethylene – a plastic commonly used for shopping bags. The scientists found that the plastic was rapidly colonised by multiple species of bacteria that congregated together to form a ‘biofilm’ on its surface. Interestingly, the biofilm was only formed by certain types of marine bacteria.

    The group, led by Dr. Mark Osborn at Sheffield, plans to investigate how the microbial interaction with microplastics varies across different habitats within the coastal seabed – research which they believe could have huge environmental benefits. “Microbes play a key role in the sustaining of all marine life and are the most likely of all organisms to break down toxic chemicals, or even the plastics themselves,” suggested Mr Harrison. “This kind of research is also helping us unravel the global environmental impacts of plastic pollution,” he said.

    More information: Jesse Harrisons poster The formation and structure of microbial biofilms associated with synthetic microplastics in coastal sediments will be displayed on Monday 29 and Tuesday 30 March at the Society for General Microbiologys spring meeting at Edinburgh International Conference Centre.

    Provided by Society for General Microbiology

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    Research Ideas

    Posted: 13th April 2010 by admin in Articles

    Fat clue to TB awakening

    March 28, 2010

    Macrophages infected with Mycobacterium tuberculosis that have been transformed to express the red fluorescent protein (constitutively), and the green fluorescent protein in response to stress from low pH. The macrophages are loaded with a lysosomal tracer (cyan) The picture was taken shortly after infection when the bacteria are stressed and trying to establish the infection. These bacterial strains allow one to probe bacterial fitness during in vivo infections and to evaluate the efficacy of drug treatments and immune therapy. Credit: Robert Abramovitch and David G. Russell

    The factors instrumental in triggering latent tuberculosis (TB) infection to progress into active disease have long remained elusive to researchers. New insight into the mystery is provided by Professor David Russell, speaking at the Society for General Microbiology’s spring meeting in Edinburgh today. His work could help develop innovative strategies for treating the disease.

    Professor Russell and his group at Cornell University in New York, USA, have demonstrated that TB-causing bacteria are able to hijack fat metabolism in the host to drive the progression of the disease. The team’s research shows that Mycobacterium tuberculosis (Mtb) is able to stimulate macrophages – the immune cells the bacterium infects – to accumulate fat droplets, turning them into “foamy” cells. This cellular transformation can trigger a reawakening of the TB infection from its latent state.

    Following initial infection by Mtb, the infected immune cells in the body can clump together in the lungs in a cellular mass that is surrounded by a fibrous cuff. This containing structure, called a tubercle, physically protects the bacteria from being destroyed by the immune system. This allows them to persist inside the host for years during a latent period in which the host shows no symptoms. The respiratory infection is reactivated only in a small percentage of individuals (often those who are immunosuppressed) in whom it progressively destroys lung tissue. Very little is known about the exact causes of reactivation and the relative roles of the host and the pathogen.

    Professor Russell’s group discovered that inside the tubercle, surface molecules of Mtb prompted host macrophage cells to take up vast quantities of cholesterol-type lipids from the surrounding blood vessels. “We think that the lipids in the newly-formed foamy cell are then expelled into the cellular environment, which contributes to the collapse of the tubercle,” he said.

    Once freed from their containing structure, the infectious bacteria are able to leak out into the airways where they can progressively destroy lung tissue. “If our model is correct, it has huge implications for vaccines and chemotherapy programmes. A more detailed knowledge of the bacterium’s life cycle and its host interactions will allow us to spot new targets for drugs – opening up new possibilities for treatment,” said Professor Russell.

    More information: Professor Russells talk Who put the tubercle in tuberculosis? will take place on Monday 29 March at 1600 at the Society for General Microbiologys spring meeting at Edinburgh International Conference Centre.

    Provided by Society for General Microbiology